Herbert J. Bernstein

	Contact Information	Professor of Computer Science Department of Mathematics and Computer Science Div. of Nat. Sci. and Math. Kramer Science Center KSC121 Dowling College Idle Hour Blvd. Oakdale, NY 11769 +1-631-244-3035
	Research Interests	bioinformatics, data representation, molecular graphics, laboratory automation, numerical linear algebra, networking and data communications, software engineering

Teaching

Fall 2008: NSM 6600 -- Technologies for Research and Instruction
MTH 1002 -- Fundamentals of Mathematics (2 sections)
Spring 2008: CSC 3962 -- Project-Oriented Computer Science
CSC 4962 -- Project-Oriented Computer Science Research,
CSC 1009 -- Introduction to Spreadsheets and Visual Basic
Fall 2007: Technologies for Research and Teaching,
CSC 3961 -- Project-Oriented Computer Science
CSC 4961 -- Project-Oriented Computer Science Research
Spring 2007: CSC 3171 -- Algorithms,
CSC 3962N -- Project-Oriented Computer Science,
CSC 4962N -- Project-Oriented Computer Science Research
Fall 2006: NSM 6600 -- Technologies for Research and Instruction,
CSC 3961N -- Project-Oriented Computer Science
CSC 4961N -- Project-Oriented Computer Science Research
Spring 2006: MTH 1002A -- Fundamentals of Mathematics,
CSC 4181N -- Project-Oriented Computer Science I
CSC 4182N -- Project-Oriented Computer Science II
Fall 2005: NSM 6600 -- Technologies for Research and Instruction,
CSC 4181N -- Project-Oriented Computer Science I
CSC 4182N -- Project-Oriented Computer Science II
Spring 2005: CSC 3080 -- Operating Systems,
CSC 4175 -- Software Engineering
CSC 4177 -- Senior Project,
MTH 1002 -- Fundamentals of Mathematics
Fall 2004: CSC 1012 -- Introduction to Computer Science,
NSM 6600 -- Technology in Research and Instruction,
NSM 6602 -- Experiment Design
Spring 2004: CSC 1012 -- Introduction to Computer Science,
CSC 1071 -- Data Structures
Fall 2003: CSC 1012 -- Introduction to Computer Science,
CSC 1071 -- Data Structures
Spring 2003: CSC 080 -- Operating Systems,
MTH 002 -- Fundamentals of Mathematics,
MTH 014 -- Pre-Calculus
Fall 2002: CSC 181 -- Advanced Research Topics in Computer Science,
CSC 077 -- Intermediate Java Programming,
CSC 175/177 -- Software Engineering/Senior Project

Research-Related Web Sites

New and Upgraded CIF Software
Management of Experimental Data in Structural Biology
Structural Biology Extensible Visualization Scripting Language
Accessible Retired Computers in Biology (ARCiB) Project
PDF of "To transpose or not to transpose; that is the question -- performance issues in the use of Java-based XML software for real-world problems," Design and Analysis Seminar, 26 Sep 2001
http://www.bernstein-plus-sons.com/software/xmlCIF/: a site discussing work on conversion between XML and CIF.
http://www.bernstein-plus-sons.com/software/CBF: CBF - specifications and an ANSI-C API for CBF/imgCIF
http://www.bernstein-plus-sons.com/software/DISCUSS.fortapps.html: a discussion on converting Fortran applications to mmCIF
http://www.bernstein-plus-sons.com/software/rasmol: rasmol - a version of R. Sayle's RasMol which accepts core CIF and mmCIF datasets and which can display alternate conformers and multiple NMR models
http://www.openrasmol.org OpenRasMol web site
http://www.bernstein-plus-sons.com/software/ciftbx: CIFtbx - a CIF toolbox (with Cyclops and cif2cif)
http://www.bernstein-plus-sons.com/software/cif2pdb: cif2pdb - a program to convert mmCIF to pseudo-PDB format
http://www.bernstein-plus-sons.com/software/pdb2cif: pdb2cif - a script to convert from PDB format to mmCIF

Education

Ph.D. 1968, Mathematics, New York University, Graduate School of Arts and Sciences.
M.S. 1965, Mathematics, New York University, Graduate School of Arts and Sciences.
B.A., magna cum laude with honors in mathematics, 1964, New York University, Washington Square College of Arts and Science.

Professional Societies

Mathematical Association of America (Life Member)
American Mathematical Society
Society for Industrial and Applied Mathematics
American Crystallographic Association
British Crystallographic Association
Mathematical Association (UK) (Life Member)
London Mathematical Society

Publications

G. Todorov, H. J. Bernstein, "VCIF2: extended CIF validation software", J. Appl. Cryst. 41, 2008, 808 -- 810 [doi:10.1107/S002188980801385X].
A. M. Lesk, H. J. Bernstein, F. C. Bernstein, "Molecular Graphics in Structural Biology," book chapter in "Computational Structural Biology " T. Schwede and M. Peitsch, eds., World Scientific Publishing Company, 2008, pp. 729 -- 770.
H. J. Bernstein, F. C. Bernstein, "Databanks of Macomolecular Structure", chapter 4 in "Database Annotation in Molecular Biology," A. M. Lesk, ed., Wiley, Chichester, UK 2005, pp. 63 -- 79.
H. J. Bernstein, A. P. Hammersley " Specification of the Crystallographic Binary File (CBF/imgCIF)", chapter 2.3 in "International Tables For Crystallography, Volume G: Definition and Exchange of Crystallographic Data," Vol. G, S. R. Hall and B. McMahon, eds., International Union of Crystallography, Springer, Dordrecht, NL, 2005, pp. 37 -- 43.
H. J. Bernstein, "The Classification of Image Data", chapter 3.7 in "International Tables For Crystallography, Volume G: Definition and Exchange of Crystallographic Data," Vol. G, S. R. Hall and B. McMahon, eds., International Union of Crystallography, Springer, Dordrecht, NL, 2005, pp. 199 -- 205.
A. P. Hammersley, H. J. Bernstein, J. D. Westbrook, "Image Dictionary (imgCIF)", chapter 4.6 in "International Tables For Crystallography, Volume G: Definition and Exchange of Crystallographic Data," Vol. G, S. R. Hall and B. McMahon, eds., International Union of Crystallography, Springer, Dordrecht, NL, 2005, pp. 444 -- 458.
H. J. Bernstein, "General Considerations in Programming CIF Applications", chapter 5.1 in "International Tables For Crystallography, Volume G: Definition and Exchange of Crystallographic Data," Vol. G, S. R. Hall and B. McMahon, eds., International Union of Crystallography, Springer, Dordrecht, NL, 2005, pp. 481 -- 487.
H. J. Bernstein, S. R. Hall, "CIFtbx: Fortran Tools For Manipulating CIFS", chapter 5.4 in "International Tables For Crystallography, Volume G: Definition and Exchange of Crystallographic Data," Vol. G, S. R. Hall and B. McMahon, eds., International Union of Crystallography, Springer, Dordrecht, NL, 2005, pp. 526 -- 538.
H. J. Bernstein, P. J. Ellis, "CBFlib: An ANSI C Library for Manipulating Image Data", chapter 5.6 in "International Tables For Crystallography, Volume G: Definition and Exchange of Crystallographic Data," Vol. G, S. R. Hall and B. McMahon, eds., International Union of Crystallography, Springer, Dordrecht, NL, 2005, pp. 544 -- 556.
P. S. Ivanov, P. Jain, D. Osei-Kuffuor, V. S. Stanev, R.Tripathi, P. N. Zhivkov, H. J. Bernstein, "Comparison of Recent Algorithms for Computing Molecular Surfaces", Proceedings, NCUR 2003, to appear.
H. J. Bernstein, "Recent changes to RasMol, recombining the variants", Trends in Biological Sciences, September 2000, Vol. 25, No. 9, pp. 453 -- 455.
H. J. Bernstein, Supplement to "Computer Programming Languages", Encyclopedia of Applied Physics, Update I, VCH Publishers, Inc. , 1999, pp 355 -- 359.
C. Fockenberg, H. J. Bernstein, G. E. Hall, J. T. Muckerman, J. M. Preses, T. J. Sears, R. E. Weston, Jr., "Repetitively sampled time-of-flight mass spectrometry for gas-phase kinetics studies", Review of Scientific Instruments, Vol. 70, 1999, pp 3259 -- 3264.
H. J. Bernstein, F. C. Bernstein and P. E. Bourne, "CIF Applications. VIII. pdb2cif: Translating PDB Entries into mmCIF Format," J. Appl. Crystallography, Vol. 31, 1998, pp. 282 -- 295.
H. J. Bernstein and S. R. Hall, "CIF Applications. VII. CYCLOPS2: Extending the Validation of CIF Data Names," J. Appl. Crystallography, Vol. 31, 1998, 278 -- 281.
H. J. Bernstein, "Software Engineering", Encyclopedia of Applied Physics , Vol. 18, VCH Publishers, Inc., 1997, pp 305 -- 340.
S. R. Hall and H. J. Bernstein, "CIF Applications. V. CIFtbx2: Extended Tool Box for Manipulating CIFs", J. Appl. Crystallography, Vol. 29, 1996, pp 598 -- 603.
J. M. Preses, G. E. Hall, J. T. Muckerman, T. J. Sears, R. E. Weston, C. Guyot, J. C. Hanson, G. W. Flynn and H. J. Bernstein, "A Fourier-Transform Spectrophotometer for Time-Resolved Emission Measurements using a 100-Point Transient Digitizer", Review of Scientific Instruments, 64(1), January 1993, pp 95 -- 102.
H. J. Bernstein, "Computer Languages", Encyclopedia of Applied Physics , Vol. 4, VCH Publishers, Inc., 1992, pp 163 -- 188.
H. J. Bernstein, J. Tichler, R. M. Brown, "How to Tell Which Way the Wind is Blowing", BNL Informal Report, BNL-41548, Department of Applied Science, Brookhaven National Laboratory, Upton, New York, July 1988.
H. J. Bernstein, "Some Comments on Highly Dynamic Network Routing", Technical Report No. 371, Computer Science Department, New York University, May 1988, 11 pp.
L. C. Andrews and H. J. Bernstein, "Lattices and Reduced Cells as Points in 6-Space and Selection of Bravais Lattice Type by Projections", Acta Cryst., Vol. A44, 1988, pp. 1009 -- 1018.
H. J. Bernstein, M. Goldstein, "Optimizing Givens' Algorithm for Multiprocessors", SIAM Journal on Scientific and Statistical Computing, Vol. 9, No. 3, May 1988, pp. 601 -- 602.
H. J. Bernstein, "An Inequality for Self-Adjoint Operators on a Hilbert Space", Proceedings of the AMS, Vol. 100, 1987, pp. 319-321. (Corrigenda in proceedings of the AMS, Vol. 101, 1987, p. 394.)
H. J. Bernstein, guest editor, "Special Section on Factory Automation and Robotics", Communications of the ACM, Vol. 29 (6) June 1986, pp. 484 -- 522.
H. J. Bernstein & M. Goldstein, "Parallel Implementation of Bisection for the Calculation of Eigenvalues of Tridiagonal Symmetric Matrices", Computing, Vol. 37, 1986, pp. 85 -- 91.
H. J. Bernstein, "Constraints in Real Time Data Acquisition and Control," presented at the Symposium on Factory Automation and Robotics, 9-11 September 1985, CIMS/NYU, and as a keynote address at Automation-86, 10-12 March 1986, Houston Texas. Technical Report No. 195, Robotics Research Report No. 59, New York University Dept. of Computer Science, December 1985.
H. J. Bernstein, "Determining the Shape of a Convex n-sided Polygon by using 2n+k Tactile Probes", New York University, Courant Institute of Mathematical Sciences, Technical Report No. 120, Robotics Report No. 29, June 1984, 13 pp., Information Processing Letters, Vol. 22, April 1986, pp. 255 -- 260.
H. J. Bernstein, P. G. Lowney & J. T. Schwartz, "SERVOL - Preliminary Proposal for a Programming Language for Real-Time Servo Control", New York University, Courant Institute of Mathematical Sciences, Technical Report No. 120, Robotics Report No. 26, May 1984, 17 pp.
H. J. Bernstein, "An Accelerated Bisection Method for the Determination of the Eigenvalues of a Symmetric Tridiagonal Matrix," Numer. Math. 43, 153 -- 160, 1984.
H. J. Bernstein & M. Goldstein, "G22.3023 - Special Topics of Industrial Interest - Network Design and Implementation", Lecture Notes, Spring Semester 1984, 160 pp.
H. J. Bernstein & M. Goldstein, "G22.2262 - Data Communications", Lecture Notes, Fall Semester 1983, Computer Science Department, Courant Institute of Mathematical Sciences, 160 pp.
H. J. Bernstein, "Enabling CTS Handshaking on the Intel 8251A USART in Asynchronous Polled Mode", Brookhaven National Laboratory Informal Report, BNL 33617, September 1983, 18 pp.
H. J. Bernstein, T. S. Clifford, H. R. Connell, W. A. Love, M. H. McKeown, T. C. Nepsee, J. A. Niederer, C. Rebbi, D. R. Stampf, J. L. Tichler, "Interactive Computing Facilities for BNL, Report of a CPC Subcommittee", Brookhaven National Laboratory Informal Report, BNL 33342, March 1983, 14 pp.
J. Logan, H. J. Bernstein, "A Monte Carlo Simulation of Compton Scattering in Positron Emission Tomography," J. Comput. Assist. Tomography, 7(2), 316-320, April 1983.
H. J. Bernstein, M. Goldstein, "RINSE - What follows WASHCLOTH", Ultracomputer Note #47, Computer Science Department, New York University, 1982.
H. J. Bernstein, J. J. Gould, R. Imossi, J. K. Kopp, W. A. Love, S. Ozaki, E. D. Platner, M. A. Kramer, "A Microprocessor-Based Single Board Computer for High Energy Physics Event Pattern Recognition", Topical Conference on the Application of Microprocessors to High Energy Physics Experiments, CERN, Geneva, Switzerland, 4 -- 6 May 1981, poster, BNL #29509.
L. C. Andrews, H. J. Bernstein, G. A. Pelletier, "A Perturbation Stable Cell Comparison Technique", Acta Cryst., Vol. A36, 1980, pp. 248 -- 252.
L. C. Andrews, H. J. Bernstein, "The NIH-EPA Chemical Information System", ONLINE, March 1979, pp. 35 -- 49.
L. C. Andrews, H. J. Bernstein, "The Squared Power Method to Fit a Plane to a Set of Points", Acta Cryst., Vol. A32, 1976, pp. 504 -- 506.
H. J. Bernstein, "What to do with that Obsolete Computer Center You're Running", Datamation, Vol. 22, No. 11, November 1976, pp. 197 -- 198.
T. F. Koetzle, L. C. Andrews, F. C. Bernstein, H. J. Bernstein, "CRYSNET: A Network for Crystallographic Computing", ACS Symposium Series, Vol. 19, 1975, pp. 1 -- 8.
H. J. Bernstein, L. C. Andrews, H. M. Berman, F. C. Bernstein, G. H. Campbell, H. L. Carrell, H. B. Chiang, W. C. Hamilton, D. D. Jones, D. Klunk, T. F. Koetzle, E. F. Meyer Jr., C. N. Morimoto, S. Sevian, R. K. Stodola, M. M. Strongson, T. V. Willoughby, "CRYSNET A Network of Intelligent Remote Graphics Terminals", Second Annual AEC Scientific Computer Information Exchange Meeting, Proceedings of the Technical Program, 1974, pp. 149 -- 161. Brookhaven National Laboratory Report #18803.
H. J. Bernstein, "Report on Magnetic Tapes and Tape Drives", Applied Mathematics Department, Brookhaven National Laboratory, Document 11.4.1, AMD 657, 1973, 31 pages.
H. J. Bernstein (as Anon.), "Management Tips from a Programmer", Datamation, Vol. 19, No. 6, June 1973, pp. 204 -- 206.
H. J. Bernstein, "Compiling Fixed-Point Multiplications", Comm. ACM, Vol. 15, 1972, p 772.
N. V. Findler, J. L. Pfaltz, H. J. Bernstein, "Four High Level Extensions of FORTRAN IV", Spartan Books, New York, 1972, 391 pages.
H. J. Bernstein, "317000 Prime Numbers", New York University, March 1970, single copy publication for Courant Institute Library, NYU.
H. J. Bernstein, "Ludeman's PL/I FORMAC Problem as Handled by SYMBOLANG", SIGSAM Bulletin, #14, January 1970, pp. 19 -- 35.
H. J. Bernstein, "Stimulus-Response", Analog Science Fiction/Science Fact, September 1969, pp. 92 -- 111.
H. J. Bernstein, "CCN-Groups of Order Divisible by Three Primes", Proc. AMS, Vol. 22, July 1969, pp. 202 -- 205.
H. J. Bernstein, "Extension of Hajòs' Factorization Theorem to some Non-Abelian Groups", (doctoral thesis), Comm. Pure and Applied Math., Vol. 21, 1968, pp. 289 -- 311.
H. J. Bernstein, "Phantasmaplasmagoria," Analog Science Fiction/Science Fact, April 1968, pp. 57 -- 66.
H. J. Bernstein, O. Moller, E. S. Rapaport, "Machine Factorization of Groups", Mathematical Algorithms, Vol. I, No. 3, 1966, pp. 39 -- 51
D. Bernstein, H. J. Bernstein, "The Twisted Nose and the Submental Film", Eye, Ear, Nose and Throat Monthly, Vol. 45, 1966, pp. 92 -- 100.
D. Bernstein, H. J. Bernstein, "Axial Submental Nasal Film", Archives of Otolaryngology, Vol. 82, 1965, pp. 430 -- 432.

Meeting Presentations

H. J. Bernstein, "Transition to object-oriented data representations: Interconversion between CIF and other formats," invited talk MS.96.3 at the XXI Congress of the International Union for Crystallography, 23 -- 31 August 2008, Osaka, Japan.
H. J. Bernstein, G. Darakev, N. Darakev, J. Jemilawon, G. McQuillan, G. Todorov, P. A. Craig, S. E. Mottarella, C. Wischmeyer, "A simplified unified approach for animations and movies using SBEVSL," poster presentation P01.02.81 at the XXI Congress of the International Union for Crystallography, 23 -- 31 August 2008, Osaka, Japan.
H. J. Bernstein, I. Awuah Asiamah, G. Darakev, N. Darakev, J. Jemilawon, N. Jia, P. Kamburov, G. McQuillan, G. Todorov, "SAXS, Lee-Richards surfaces and a simplified command set for maps," poster presentation MP039 at the 2008 Meeting of the American Crystallographic Association (ACA 2008), 31 May -- 5 June 2008, Knoxville, TN, abstract W0070.
P. A. Craig, S. E. Mottarella, C. Wischmeyer, H. J. Bernstein, I. Awuah Asiamah, D. Boycheva, G. Darakev, N. Darakev, P. Gozo, J. Jemilawon, "Using RasMol, PyMol and Jmol with the Structural Biology Extensible Visualization Scripting Langauge (SBEVSL), " poster presentation MP054 at the 2008 Meeting of the American Crystallographic Association (ACA 2008), 31 May -- 5 June 2008, Knoxville, TN, abstract W0073.
S. Mottarella, B. Hanson, C. Westin, P. Craig, H. Bernstein, "A Rasmol to PyMOL Translator," poster presentation TP161 at the 2008 Meeting of the American Crystallographic Association (ACA 2008), 31 May -- 5 June 2008, Knoxville, TN, abstract W0049.
C. Wischmeyer, P. Craig, H. Bernstein, "Homology Exploration with ProMOL, " poster presentation SP169 at the 2008 Meeting of the American Crystallographic Association (ACA 2008), 31 May -- 5 June 2008, Knoxville, TN, abstract W0050.
H. J. Bernstein, "Progress in adoption of imgCIF and integration with NeXus," presentation at imgCIF workshop, Brookhaven National Laboratory, 22 May 2008.
H. J. Bernstein, "Routing Students in Computer Science", presentation for "Preparing the Computing Workforce; the Interface Between K-12 and College" panel at CCSCE 2007 meeting of the Consortium for Computing Sciences in Colleges -- Eastern Region, 12 -- 13 October 2007, St. Joseph's College, Patchogue, NY, with panel abstract in H. J. Bernstein, J. S. Kay, W. McAllister, R. K. Raj, "Preparing the computing workforce: the interface between K-12 and college," Journal of Computing Sciences in Colleges, 23, 2008, pp. 175 -- 178.
H. J. Bernstein, "ImgCIF and the Interaction with NeXus", workshop presentation at imgCIF Workshop, 17 August 2007, Diamond Light Source, Chilton, UK, organized in conjunction with BSR 2007.
H. J. Bernstein, "imgCIF Progress, A Report to the Community", poster presentation at poster session B, 9th International Conference on Biology and Synchrotron Radiation (BSR 2007), 13-17 August 2007, Manchester, UK. Supplemented by oral presentation in imgCIF workshop, 14 August 2007 at BSR 2007, Manchester, UK.
J. Jemilawon, I. Awuah Asiamah, H. J. Bernstein, G. Darakev, N. Darakev, P. Kamburov, "Use of CBFlib for Map Support", poster presentation at poster session B, 9th International Conference on Biology and Synchrotron Radiation (BSR 2007), 13-17 August 2007, Manchester, UK.
G. Darakev, H. J. Bernstein, "Achieving portability for synchrotron images using NeXus and XML", poster presentation at poster session B, 9th International Conference on Biology and Synchrotron Radiation (BSR 2007), 13-17 August 2007, Manchester, UK.
H. J. Bernstein, I. Awuah Asiamah, G.Darakev, J. Jemilawon, P. Kamburov, "Support for Maps in RasMol", poster presentation TP174 at the 2007 Meeting of the American Crystallographic Association (ACA 2007), 21-26 July 2007, Salt Lake City, UT, abstract W0059.
C. Westin, B. Hanson, H.J. Bernstein, I. Awuah Asiamah, D. Boycheva, G. Darakev, J. Jemilawon, N. Jia, P. Kamburov, G. Todorov, P.A. Craig, S. Mottarella, "SBEVSL: Communicating Scripts Between Molecular Visualization Programs", poster presenation TP172 at the 2007 Meeting of the American Crystallographic Association (ACA 2007), 21-26 July 2007, Salt Lake City, UT, abstract E0003.
H. J. Bernstein, "CIF, mmCIF, imgCIF and more: Reducing Friction in PX Sychrotron Image Data Acquisition", workshop presentation, session 2A, "Standards for data \format and management" at Second International CrystalGrid Workshop on Crystallographic Data Management (CGW 2007), 26-28 April 2007, Bloomington, IN.
H. J. Bernstein, "CIF, mmCIF, imgCIF and more: Reducing Friction in Managing Data in Structural Biology" given on 12 January 2007 at the Paul Scherrer Institut, Villigen CH and 17 \January 2007 at the European Synchrotron Radiation Facility, Genoble, FR.
H. J. Bernstein, "Notes on Computer Science Education -- Is it Broken?", panel presentation, session 2A. "Panel: Broken or Not? Fixing Undergraduate Computing Education in a Multi-Disciplinary World" at CCSCNE 2007 meeting of the Consortium for Computing Sciences in Colleges -- Northeastern Region, 20-21 April 2007, Rochester Institute of Technology, Rochester, NY.
R. M. Sweet, H. J. Bernstein, "imgCIF: The Management of Synchrotron Image Data", workshop WK.02 at the 2006 meeting of the American Crystallographic Association, 22-27 July 2005, Honolulu, HI, abstract E0025.
G. Todorov, K. Z. Mitev, H. J. Bernstein, "Extended CIF Validation Software", poster presentation S-P083 at the 2006 meeting of the American Crystallographic Association, 22-27 July 2005, Honolulu, HI, abstract W0169.
G. Darakev, G. Todorov, V. Litchev, K. Z. Mitev, H. J. Bernstein, "NeXus with Binary XML - Efficient Support of Binary Data in the XML Implementation of the NeXus File Format", poster presentation M-P156 at the 2006 meeting of the American Crystallographic Association, 22-27 July 2005, Honolulu, HI, abstract W0165.
K. Mitev, H. Todorov, H. J. Bernstein, "CIFFOLD: Managing Long Lines in CIF", presentation MS86.30.3 at XX Congress of the International Union of Crystallography, 23-31 August 2005, Florence, IT, (see abstract in Acta Cryst. (2005) A61 (on-line supplement), p C109).
H. J. Bernstein, F. C. Bernstein, "The PDB Format in the 21st Century, a Modest Proposal", poster P.24.08.2 at XX Congress of the International Union of Crystallography, 23-31 August 2005, Florence, IT, (see abstract in Acta Cryst. (2005) A61 (on-line supplement), p C484).
P. N. Zhivkov, H. J. Bernstein, "Approximating Short-Range Lee-Richards Molecular Surfaces by Blurring" poster at Chicago ACA Meeting, 17 -- 22 July 2004, Abstract W0037.
H. J. Bernstein and F. C. Bernstein, "Molecular Graphics Color Management for the Colorblind", presentation and poster at Cincinnati ACA Meeting, 26 -- 31 July 2003, Abstract P131.
H.J. Bernstein and F.C. Bernstein, "Extension of RasMol to Display Surfaces, to Handle CML/XML and other new Features" presentation at XIX Congress and General Assembly of the International Union of Crystallography, Geneva, Switzerland, August 6 -- 15, 2002. Acta Cryst. (2002). A58 (Supplement), C217.
H.J. Bernstein and F.C. Bernstein, "yaxdf and the Interaction between CIF and XML" presentation at XIX Congress and General Assembly of the International Union of Crystallography, Geneva, Switzerland, August 6 -- 15, 2002. Acta Cryst. (2002). A58 (Supplement), C217.
H.J. Bernstein and F.C. Bernstein, "xmlCIF: A Proposal for Faithful Translation Between XML and Extended CIF", poster at St. Paul ACA Meeting, 22 -- 27 July 2000, Abstract E0009.
F. C. Bernstein and H. J. Bernstein, "Graphical Representation of Alternate Conformers", poster session, XVIII IUCr Congress & General Assembly, Glasgow, Scotland, 4 -- 13 August 1999, and Acta Cryst, Vol A55 (Supplement) 264.
H. J. Bernstein, P. J. Ellis, A. P. Hammersley, A. J. Howard, J. W. Pflugrath, R. M. Sweet, "Proposed Crystallographic Binary File and Image-supportin CIF with API and Dictionary", poster session, XVIII IUCr Congress & General Assembly, Glasgow, Scotland, 4 -- 13 August 1999, and Acta Cryst, Vol A55 (Supplement) 235.
H. J. Bernstein and F. C. Bernstein, "Recent Developments in Software Tools for CIF and mmCIF", presentation at American Crystallographic Association Meeting, Arlington, VA, 18 -- 23 July 1998.
H. J. Bernstein, F. C. Bernstein, "Converting Fortran Applications for use with CIF", invited presentation at mmCIF Software Developers' Workshop, Rutgers, 17 -- 19 October 1997.
J. Westbrook, D. Argentar, H. M. Berman, H. Bernstein, F. Bernstein, J. Biggs, P. Bourne, I. D. Brown, S. Bryant, J. Fait, P. Edgington, P. Fitzgerald, A. Hammersley, P. Keller, B. McMahon, P. Murray-Rust, O. Ritter, R. Sayle, J. Thornton, B. Toby, E. Ulrich, K. Watenpaugh, S. Wodak, "CIF Application Developers' Workshop," at St. Louis ACA Meeting, 19 -- 25 July 1997, Abstract E253. Served with J. Westbrook as co-chair of the session.
F. C. Bernstein and H. J. Bernstein, "Data Representation of Disorder and Alternate Conformations in Macromolecular Structures," poster at St. Louis ACA Meeting, 19 -- 25 July 1997, Abstract E116.
F. C. Bernstein, H. J. Bernstein and P. E., Bourne, "An Introduction to mmCIF: Conversion between PDB Format and mmCIF", poster at the 24th Aharon Katzir-Katchalsky Conference on Bioinformatics - Structure, 17 -- 21 November 1996.
H. J. Bernstein and L. C. Andrews, "Software for Lattice Identification in G-6," invited presentation for Seattle IUCr meeting, 7 -- 17 August 1996.
H. J. Bernstein, F. C. Bernstein and P. E., Bourne, "Moving Between mmCIF and PDB Format", poster at BCA Meeting, Cambridge England, 1 -- 4 April 1996.
F. C. Bernstein and H. J. Bernstein, "Translating mmCIF Data into PDB Entries", invited presentation for CIF workshop at Seattle IUCr meeting, 7 -- 17 August 1996.
P. E., Bourne, H. J. Bernstein and F. C. Bernstein, "Translating PDB Entries into mmCIF", invited presentation for CIF workshop at Seattle IUCr meeting, 7 -- 17 August 1996.
H. J. Bernstein and S. R. Hall, "Reading, Writing and Validating CIFs using CIFtbx2 AND CYCLOPS," invited presentation for CIF workshop at Seattle IUCr meeting, 7 -- 17 August 1996.
L. C. Andrews and H. J. Bernstein, "Bravais Lattice Invariants", poster session, ACA Meeting, Albuquerque, New Mexico, May 1993, and Acta Cryst., Vol. A51, 1995, pp. 413 -- 416.
H. J. Bernstein, "Brookhaven National Laboratory's Technical Assistance to the NRC for "Radioactive Materials Released from Nuclear Power Plants"", a presentation to the Nuclear Utility Meteorological Data Users Group Meeting (NUMUG), April 28 -- 30, 1993, Boston, MA [note: based on work by J. Tichler, K. Doty, J. Congemi]
J. L. Tichler, H. J. Bernstein, S. F. Bobrowski, R.B. Melton, A. P. Campbell, D. M. Edwards, P. Kanciruk and P. Singley, " Design and Implementation of a Computer Based Site Operations Log for the ARM Program", presented at SDM 92, A Planning Workshop, Scientific Data Management Workshop, 1992, The Role of Metadata in Managing Large Environmental Sciences Data Sets, Salt Lake City, UT, November 3 -- 5, 1992.
L. C. Andrews and H. J. Bernstein, "The G-6 Method of Bravais Lattice Determination", poster session, ACA Meeting, Seattle Washington, July 1989.
H. J. Bernstein, "Where we Stand in Data Communications for Engineering R&D", talk presented at 1987 ASME International Computers in Engineering Conference, August 9 -- 13, 1987, in panel session 41 on "Information and Access Networks for Supercomputing", 12 August 1987.
H. J. Bernstein, "Digital Communications", presented as an invited talk in the 1986 New Horizons in Physics and Engineering Lecture Series on Telecommunications at the College at New Paltz, State University of New York, 9 October 1986.
H. J. Bernstein, "A Tutorial on Maximum Entropy", presented as an invited talk at the Institute for Cancer Research, Fox Chase Center, Philadelphia, Pennsylvania, 6 February 1986.
D. R. Christman, H. L. Atkins, H. J. Bernstein, J. S. Fowler, B. M. Gallagher, T. Ido, R. M. Lambrecht, R. R. MacGregor, M. Reivich, T. Ruth, P. Som & A. P. Wolf, "The Use of PETT III at Brookhaven", First International Symposium on Positron Emission Tomography, Montreal, Canada, 1 -- 3 June 1978.
J. Tichler, H. Bernstein, R. M. Brown, P. Daum, "A Data Acquisition System for Environmental Monitoring Aboard a Twin-Engined Aircraft," Proceedings of the Fifth Symposium on Meteorological Observations and Instrumentation, April 11 -- 15, 1983, Toronto, Ont., Canada.
E. F. Meyer Jr., C. N. Morimoto, J. Villarreal, H. M. Berman, H. L. Carrell, R. K. Stodola, T. F. Koetzle, L. C. Andrews, F. C. Bernstein, H. J. Bernstein, "CRYSNET, A Crystallographic Computing Network with Interactive Graphics Display", FASEB Meeting, Aspen Colorado, June 1974.

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